Bioconductor Salmon rna seq

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894

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deseq2 salmon rna seq salmon

updated 5.5 years ago by Michael Love 42k • written 5.5 years ago by danalvoronov ▴ 10

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1.7k

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salmon rna seq deseq2

updated 5.5 years ago by Michael Love 42k • written 5.5 years ago by Bob • 0

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1.2k

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deseq2 gsea tpm rnaseq salmon rna seq

updated 5.6 years ago by Michael Love 42k • written 5.6 years ago by leo_CD • 0

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1.4k

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tximport salmon rna seq de novo

updated 5.6 years ago by James W. MacDonald 65k • written 5.6 years ago by RMRG ▴ 10

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1.8k

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drimseq stageR dtu salmon rna seq

updated 5.8 years ago by Koen Van den Berge ▴ 180 • written 5.8 years ago by fiona.dick91 ▴ 60

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910

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salmon rna seq tximport ruv-seq deseq2

updated 6.0 years ago by Michael Love 42k • written 6.0 years ago by mad6kj • 0

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2.5k

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sleuth R salmon rna seq salmon

6.5 years ago Walter F. Baumann ▴ 10

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1.1k

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salmon rna seq

updated 6.6 years ago by Michael Love 42k • written 6.6 years ago by tanyabioinfo ▴ 20

8 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Johannes Rainer ★ 2.0k

Dear Daniele, for which Ensembl release would you need the data? the most recent is 112, but if you used a different version before it wou…

Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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Popular Question to Johannes Rainer ★ 2.0k